Options: -C 0.25 -M 2 

=== Classifier model (full training set) ===

J48 pruned tree
------------------

NM_006086 <= 7.641739
|   NM_031409 <= 9.158233
|   |   AB014771 <= 6.611311
|   |   |   NM_001001795 <= 13.258579: breast_adenocarcinoma (6.0)
|   |   |   NM_001001795 > 13.258579: normal (2.0)
|   |   AB014771 > 6.611311
|   |   |   lincRNA:chr6:167397093-167399807_F <= 4.36455
|   |   |   |   BX470739 <= 4.813462: breast_adenocarcinoma (5.0)
|   |   |   |   BX470739 > 4.813462: normal (4.0)
|   |   |   lincRNA:chr6:167397093-167399807_F > 4.36455: normal (125.0/1.0)
|   NM_031409 > 9.158233: breast_adenocarcinoma (9.0/1.0)
NM_006086 > 7.641739
|   NM_006187 <= 4.681318: normal (8.0/1.0)
|   NM_006187 > 4.681318
|   |   NM_145279 <= 9.490225
|   |   |   A_24_P186944 <= 15.879135: breast_adenocarcinoma (116.0)
|   |   |   A_24_P186944 > 15.879135
|   |   |   |   NM_017925 <= 10.831125: breast_adenocarcinoma (4.0)
|   |   |   |   NM_017925 > 10.831125: normal (3.0)
|   |   NM_145279 > 9.490225
|   |   |   A_33_P3387911 <= 4.551983: normal (5.0)
|   |   |   A_33_P3387911 > 4.551983: breast_adenocarcinoma (2.0)

Number of Leaves  : 	12

Size of the tree : 	23


Time taken to build model: 5.46 seconds

Time taken to test model on training data: 2.38 seconds

=== Error on training data ===

Correctly Classified Instances         286               98.9619 %
Incorrectly Classified Instances         3                1.0381 %
Kappa statistic                          0.9792
Mean absolute error                      0.0191
Root mean squared error                  0.0977
Relative absolute error                  3.8148 %
Root relative squared error             19.5315 %
Total Number of Instances              289     


=== Detailed Accuracy By Class ===

                 TP Rate  FP Rate  Precision  Recall   F-Measure  MCC      ROC Area  PRC Area  Class
                 0,993    0,014    0,986      0,993    0,990      0,979    0,996     0,993     normal
                 0,986    0,007    0,993      0,986    0,989      0,979    0,996     0,996     breast_adenocarcinoma
Weighted Avg.    0,990    0,010    0,990      0,990    0,990      0,979    0,996     0,994     


=== Confusion Matrix ===

   a   b   <-- classified as
 145   1 |   a = normal
   2 141 |   b = breast_adenocarcinoma

Time taken to perform cross-validation: 10.23 seconds


=== Stratified cross-validation ===

Correctly Classified Instances         232               80.2768 %
Incorrectly Classified Instances        57               19.7232 %
Kappa statistic                          0.6057
Mean absolute error                      0.1992
Root mean squared error                  0.4418
Relative absolute error                 39.8517 %
Root relative squared error             88.3633 %
Total Number of Instances              289     


=== Detailed Accuracy By Class ===

                 TP Rate  FP Rate  Precision  Recall   F-Measure  MCC      ROC Area  PRC Area  Class
                 0,781    0,175    0,820      0,781    0,800      0,606    0,805     0,773     normal
                 0,825    0,219    0,787      0,825    0,805      0,606    0,805     0,738     breast_adenocarcinoma
Weighted Avg.    0,803    0,197    0,804      0,803    0,803      0,606    0,805     0,756     


=== Confusion Matrix ===

   a   b   <-- classified as
 114  32 |   a = normal
  25 118 |   b = breast_adenocarcinoma