Options: -L 0.3 -M 0.2 -N 500 -V 0 -S 0 -E 20 -H 10 === Classifier model (full training set) === Sigmoid Node 0 Inputs Weights Threshold -0.7964986503705173 Node 4 -0.025412438281354664 Node 5 1.524807000357757 Node 6 -0.21362252135371695 Node 7 -0.3325002627510908 Node 8 -0.5359495669310892 Node 9 -2.713379768456326 Node 10 -0.46185104558259044 Node 11 -2.56614523749077 Node 12 -0.500030529359731 Node 13 -0.19076500055657286 Sigmoid Node 1 Inputs Weights Threshold -1.2112281373130365 Node 4 -0.4277420187135288 Node 5 1.6022045993762906 Node 6 -0.22697317989521684 Node 7 -0.005162984132919268 Node 8 -1.2425574110297077 Node 9 3.432770297188812 Node 10 -1.1788095276212929 Node 11 -2.3711859737650967 Node 12 -1.354168423706069 Node 13 -0.8362342208036903 Sigmoid Node 2 Inputs Weights Threshold -0.048215711978704036 Node 4 -0.29667814696105227 Node 5 -2.4625730610414127 Node 6 0.22610182774826604 Node 7 1.8894300882665094 Node 8 -1.7727090767034677 Node 9 -2.3816071478409926 Node 10 -1.8054447267434708 Node 11 4.201745115219879 Node 12 -1.7567432692757152 Node 13 -0.7875120591132254 Sigmoid Node 3 Inputs Weights Threshold -1.5348409781352075 Node 4 0.050780292645287065 Node 5 -2.054142434739138 Node 6 -1.2265038288609837 Node 7 -2.7009384833320675 Node 8 1.7008368755840897 Node 9 0.7112160455547185 Node 10 1.605709035603063 Node 11 0.5526557419727853 Node 12 1.1975753284254862 Node 13 0.31415232706414653 Sigmoid Node 4 Inputs Weights Threshold 0.04162076812115362 Attrib 1007_s_at 0.028298938037557935 Attrib 1053_at 0.003680334334728846 Attrib 117_at 0.04109735785332375 Attrib 121_at 0.015621911897816471 Attrib 1255_g_at -0.05296102570534736 Attrib 1294_at -0.0414735774260021 Attrib 1316_at 0.04185519376150506 Attrib 1320_at 0.00826005209815542 Attrib 1405_i_at -0.043248285285107074 Attrib 1431_at 0.034829433426475966 Attrib 1438_at 0.019616242015558734 Attrib 1487_at -0.0033284028966503003 Attrib 1494_f_at -0.020612804905749744 Attrib 1552256_a_at 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1552295_a_at -0.010695029198573585 Attrib 1552296_at 0.04048954698817635 Attrib 1552299_at -0.019617852069665796 Attrib 1552301_a_at -0.03488929868887803 Attrib 1552302_at -0.05102374655713262 Attrib 1552303_a_at -0.02343035651365202 Attrib 1552304_at 0.04519277074221789 Attrib 1552306_at 0.005980515554010453 Attrib 1552307_a_at 0.009620814544816586 Attrib 1552309_a_at -0.03099044295411225 Attrib 1552310_at 0.039298908716910594 Attrib 1552311_a_at -0.039104038726093214 Attrib 1552312_a_at 0.027648514429302704 Attrib 1552314_a_at -0.019481287976503107 Attrib 1552315_at -0.012566310736702077 Attrib 1552316_a_at -0.004221384367535626 Attrib 1552318_at 0.03575992757302864 Attrib 1552319_a_at -0.02646038626151455 Attrib 1552320_a_at -0.026249994627447846 Attrib 1552321_a_at 0.03190523604590613 Attrib 1552322_at 0.022319807486763318 Attrib 1552323_s_at -0.02248727981100426 Attrib 1552325_at 0.013657849365233213 Attrib 1552326_a_at -0.018703121799081016 Attrib 1552327_at -0.029538012917972284 Attrib 1552329_at -0.00750866111306095 Attrib 1552330_at 0.02473722434047178 Attrib 1552332_at -6.241504550047526E-4 Attrib 1552334_at -0.014636929753144488 Attrib 1552335_at 0.03319860759677149 Attrib 1552337_s_at -0.033162084560477874 Attrib 1552338_at 0.03750449787694229 Attrib 1552340_at 0.012681645249504837 Attrib 1552343_s_at -0.04713693684568887 Attrib 1552344_s_at 0.02783115874198605 Attrib 1552347_at 2.3225125117550834E-4 Attrib 1552348_at 0.024568235922366025 Attrib 1552349_a_at -0.04534115371277164 Attrib 1552354_at -0.024494130124683846 Attrib 1552355_s_at -0.0561526830585321 Attrib 1552359_at -0.029830399610867028 Attrib 1552360_a_at -0.004247713303409919 Attrib 1552362_a_at -0.018563308738178498 Attrib 1552364_s_at -0.051797537159336826 Attrib 1552365_at 0.019049615724120922 Attrib 1552367_a_at -0.029358456453520126 Attrib 1552368_at -0.04504549069496849 Attrib 1552370_at -0.05395328283610996 Attrib 1552372_at -0.028748853029477665 Attrib 1552373_s_at -0.01465421314642209 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1552487_a_at 0.002794068513154757 Attrib 1552489_s_at -0.029156565585022644 Attrib 1552490_at 0.002583726565721684 Attrib 1552491_at -0.03427727279940208 Attrib 1552493_s_at 0.011156237248258033 Attrib 1552494_at -0.03143453370931593 Attrib 1552496_a_at -0.04508217578783933 Attrib 1552497_a_at -0.02159380447300932 Attrib 1552498_at -0.0475171988144897 Attrib 1552499_a_at -0.03580491083147773 Attrib 1552501_a_at -0.030195833547140106 Attrib 1552502_s_at 0.0388724909582246 Attrib 1552503_at -0.04011331980813009 Attrib 1552504_a_at 0.02640722479884232 Attrib 1552506_at 0.013490699829783591 Attrib 1552507_at 0.03175161950363358 Attrib 1552508_at -0.03415851910017987 Attrib 1552509_a_at 0.008186525842255151 Attrib 1552510_at 0.04308484496004839 Attrib 1552511_a_at -0.0028984381827637106 Attrib 1552514_at 0.005083633756944715 Attrib 1552515_at 0.0440785326455103 Attrib 1552516_a_at 0.0422777860243838 Attrib 1552518_s_at -0.040550225995354905 Attrib 1552519_at -0.03757354398902349 Attrib 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Attrib 200626_s_at -0.05431552247522432 Attrib 200627_at 0.010319341303352355 Attrib 200628_s_at -0.004786601576599544 Attrib 200629_at 0.002472393902625578 Attrib 200630_x_at -0.026071408090890855 Attrib 200631_s_at 0.028910761106219023 Attrib 200632_s_at -0.024273244309364426 Attrib 200633_at -3.083225395101838E-4 Attrib 200634_at -0.043771759107949476 Attrib 200635_s_at 0.02831446464494504 Attrib 200636_s_at 0.03500359812281502 Attrib 200637_s_at 0.01117060203672062 Attrib 200638_s_at -0.054067176184878045 Attrib 200639_s_at 0.028677965017064135 Attrib 200640_at -0.0470795377432617 Attrib 200641_s_at -0.03538851628806265 Attrib 200642_at -0.02639392572274999 Attrib 200643_at 0.03720523288547484 Attrib 200644_at 0.05220420046744498 Attrib 200645_at -0.043903375002313 Attrib 200646_s_at -0.012096877097446682 Attrib 200647_x_at 0.010092964112263436 Attrib 200648_s_at 0.013790922313945752 Attrib 200649_at -0.037469211340699256 Attrib 200650_s_at 0.020675734868148568 Attrib 200651_at 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Attrib 200877_at 0.03216258394366885 Attrib 200878_at -0.042203325278343806 Attrib 200879_s_at 0.014526313255611042 Attrib 200880_at -0.03828282671007347 Attrib 200881_s_at 0.03980241262761098 Attrib 200882_s_at 0.021006316534040843 Attrib 200883_at -0.019233117539664037 Attrib 200884_at -0.03034625115802313 Attrib 200885_at -0.001317231872942365 Attrib 200886_s_at -0.04134738898408263 Attrib 200887_s_at -0.04193192370218918 Attrib 200888_s_at 0.027893226183608108 Attrib 200889_s_at 0.004576940628403722 Attrib 200890_s_at -0.027605231566415058 Attrib 200891_s_at -0.051840983267380666 Attrib 200892_s_at -0.014812001060969282 Attrib 200893_at -0.005244925372644483 Attrib 200894_s_at 0.0011376613030568594 Attrib 200895_s_at -0.010098732624870654 Attrib 200896_x_at -0.03827225256928911 Attrib 200897_s_at -0.020220946003565127 Attrib 200898_s_at 0.043322606340360816 Attrib 200899_s_at 0.05351286436249112 Attrib 200900_s_at -0.011854151957777654 Attrib 200901_s_at 0.03660362956928853 Attrib 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Attrib 200823_x_at -0.012581916551749124 Attrib 200824_at 0.030837041704739283 Attrib 200825_s_at 0.02909169485067725 Attrib 200826_at -0.023859883568988584 Attrib 200827_at 0.014460383355272916 Attrib 200828_s_at -0.014937042231353337 Attrib 200829_x_at -0.012843650165278787 Attrib 200830_at 0.019269154263436932 Attrib 200831_s_at 0.0024987862183459097 Attrib 200832_s_at 0.0025119115014260594 Attrib 200833_s_at -0.04628442231668037 Attrib 200834_s_at 0.026565833195463406 Attrib 200835_s_at 0.040522190615471056 Attrib 200836_s_at 0.03245885010315252 Attrib 200837_at 0.03548486476200773 Attrib 200838_at 0.048837732304519516 Attrib 200839_s_at 0.0354349559787701 Attrib 200840_at -0.012003135701121107 Attrib 200841_s_at 0.04698290559854031 Attrib 200842_s_at -0.031918780651709854 Attrib 200843_s_at -0.03144550377798341 Attrib 200844_s_at 0.01369444517751537 Attrib 200845_s_at 0.057426282885307225 Attrib 200846_s_at 0.028474281611955084 Attrib 200847_s_at -0.02699542454304583 Attrib 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Attrib 200825_s_at 0.01102500641888076 Attrib 200826_at 0.055510178259164523 Attrib 200827_at -0.025286085603589345 Attrib 200828_s_at -0.028433849191177044 Attrib 200829_x_at -0.005171835636855507 Attrib 200830_at 0.018963502064980858 Attrib 200831_s_at -0.02104145406533851 Attrib 200832_s_at -0.047174600633157725 Attrib 200833_s_at 0.05677479999136385 Attrib 200834_s_at 0.039150107934362716 Attrib 200835_s_at 7.602307211252372E-4 Attrib 200836_s_at 0.03940204377346589 Attrib 200837_at -0.013483117402567735 Attrib 200838_at 0.051685513251280325 Attrib 200839_s_at -0.023171931327337532 Attrib 200840_at -0.03936870388219763 Attrib 200841_s_at 0.00950561542928522 Attrib 200842_s_at -0.0012147736218078647 Attrib 200843_s_at -0.003351779441013809 Attrib 200844_s_at -0.03017762736548501 Attrib 200845_s_at -0.024093073003280573 Attrib 200846_s_at 0.034404631651154594 Attrib 200847_s_at -0.010752634636212708 Attrib 200848_at -0.044980606061702386 Attrib 200849_s_at 0.021632798247777904 Attrib 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Attrib 200716_x_at -0.023041262998074543 Attrib 200717_x_at 0.001248670564218325 Attrib 200718_s_at 0.04673103932161944 Attrib 200719_at 0.020705805633529268 Attrib 200720_s_at -0.045885727072544756 Attrib 200721_s_at 0.011463314654591293 Attrib 200722_s_at -0.042187568057411896 Attrib 200723_s_at -0.03793127232711568 Attrib 200724_at -0.027853576096250825 Attrib 200725_x_at 0.009400174565407173 Attrib 200726_at 0.012514524943236776 Attrib 200727_s_at 0.019455581964081363 Attrib 200728_at 0.019402452545434205 Attrib 200729_s_at 0.045210824059334825 Attrib 200730_s_at 0.03250413342135091 Attrib 200731_s_at 0.04134223977355651 Attrib 200732_s_at 0.00903475756449948 Attrib 200733_s_at -0.0023338652978833058 Attrib 200734_s_at -8.399329045966112E-4 Attrib 200735_x_at -0.019253088837982598 Attrib 200736_s_at -0.04263197973084405 Attrib 200737_at 0.04306994259899477 Attrib 200738_s_at -0.026485973839811376 Attrib 200739_s_at 0.007832019502974323 Attrib 200740_s_at -0.020643340570666115 Attrib 200741_s_at 0.014022557310422137 Attrib 200742_s_at 0.010588440973615209 Attrib 200743_s_at -0.03574443499991773 Attrib 200744_s_at -0.040624502500911375 Attrib 200745_s_at 0.04744461843862715 Attrib 200746_s_at 0.04902400886266016 Attrib 200747_s_at -0.04712416863138815 Attrib 200748_s_at 0.04514047565652801 Attrib 200749_at 0.0055832795233686 Attrib 200750_s_at -0.0071438830866536965 Attrib 200751_s_at 0.0010405651203264823 Attrib 200752_s_at 0.020962249707054792 Attrib 200753_x_at -0.03694189332467428 Attrib 200754_x_at -0.007545804561114037 Attrib 200755_s_at 0.02380825172898751 Attrib 200756_x_at -0.01356116227664596 Attrib 200757_s_at 0.038743456406618415 Attrib 200758_s_at 0.03957171688079266 Attrib 200759_x_at 0.031358192043552835 Attrib 200760_s_at -0.030568389737613222 Attrib 200761_s_at 0.02570544948645501 Attrib 200762_at 0.023091122031266648 Attrib 200763_s_at 0.0035873042687225728 Attrib 200764_s_at 0.034017400443312196 Attrib 200765_x_at -0.03718474718078534 Attrib 200766_at -0.028475699640090977 Attrib 200767_s_at 0.03757871474929757 Attrib 200768_s_at -0.037804898414513205 Attrib 200769_s_at 0.020749233576246383 Attrib 200770_s_at 0.03391412169980387 Attrib 200771_at -0.02454810915333122 Attrib 200772_x_at -0.04916483268166071 Attrib 200773_x_at -0.008398441194317681 Attrib 200774_at -0.05128972749686167 Attrib 200775_s_at 0.033473850151062266 Attrib 200776_s_at -0.0067621433259059255 Attrib 200777_s_at 0.03058276780316171 Attrib 200778_s_at -0.03064928358148132 Attrib 200779_at 0.036891436709105434 Attrib 200780_x_at -0.016734308695404453 Attrib 200781_s_at 0.04144733334721057 Attrib 200782_at 0.01278151160805889 Attrib 200783_s_at 0.009028667925294541 Attrib 200784_s_at 0.030060465385205223 Attrib 200785_s_at 0.013688849069726401 Attrib 200786_at 0.031801476573256944 Attrib 200787_s_at 0.008036684593020364 Attrib 200788_s_at -0.04236663184853577 Attrib 200789_at -0.03761882437541067 Attrib 200790_at -0.03151455777217374 Attrib 200791_s_at 0.03283159416845822 Attrib 200792_at 0.01763899841575188 Attrib 200793_s_at 0.037521929303604255 Attrib 200794_x_at -0.035187510799562345 Attrib 200795_at 0.02346266572929754 Attrib 200796_s_at 0.03978024177972011 Attrib 200797_s_at -0.0333496640578967 Attrib 200798_x_at -0.005156278794579001 Attrib 200799_at 0.01818306579723904 Attrib 200800_s_at -0.028778851679950698 Attrib 200801_x_at -0.007943974915836347 Attrib 200802_at 0.01641578175028587 Attrib 200803_s_at -0.0314326430803735 Attrib 200804_at -0.019204932470610576 Attrib 200805_at 0.038798992522903177 Attrib 200806_s_at 0.03521725514126573 Attrib 200807_s_at -0.018095775162295998 Attrib 200808_s_at 0.008203424214796563 Attrib 200809_x_at -0.025163457531347747 Attrib 200810_s_at 0.024585275857489316 Attrib 200811_at 0.04105188966206868 Attrib 200812_at 0.04304168351793265 Attrib 200813_s_at -0.04475085566531411 Attrib 200814_at -0.03263810883506256 Attrib 200815_s_at -0.0019693645352483993 Attrib 200816_s_at 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AFFX-LysX-5_at 0.022802981390863484 Attrib AFFX-LysX-M_at 0.02050539296552015 Attrib AFFX-M27830_3_at -0.0445837867017893 Attrib AFFX-M27830_5_at -0.03590442140236581 Attrib AFFX-M27830_M_at -0.030845345443810988 Attrib AFFX-PheX-3_at 0.0160751438889434 Attrib AFFX-PheX-5_at -0.04094125770791352 Attrib AFFX-PheX-M_at -0.03393004597542629 Attrib AFFX-r2-Bs-dap-3_at -0.04623914846649903 Attrib AFFX-r2-Bs-dap-5_at -0.03309434215647569 Attrib AFFX-r2-Bs-dap-M_at 0.04418345958121088 Attrib AFFX-r2-Bs-lys-3_at -0.03748532553536053 Attrib AFFX-r2-Bs-lys-5_at -0.03656761802694744 Attrib AFFX-r2-Bs-lys-M_at 0.027058133919084938 Attrib AFFX-r2-Bs-phe-3_at -0.0418689840728072 Attrib AFFX-r2-Bs-phe-5_at -0.04174888410041825 Attrib AFFX-r2-Bs-phe-M_at 0.04463244706160729 Attrib AFFX-r2-Bs-thr-3_s_at -0.022523109029767695 Attrib AFFX-r2-Bs-thr-5_s_at -0.0145668086199003 Attrib AFFX-r2-Bs-thr-M_s_at 0.030394382930234887 Attrib AFFX-r2-Ec-bioB-3_at 0.026916252198084335 Attrib AFFX-r2-Ec-bioB-5_at 0.007654438984434807 Attrib AFFX-r2-Ec-bioB-M_at 0.019255876260497875 Attrib AFFX-r2-Ec-bioC-3_at 0.042058441226801066 Attrib AFFX-r2-Ec-bioC-5_at -0.017919601164853013 Attrib AFFX-r2-Ec-bioD-3_at 0.019153054072384858 Attrib AFFX-r2-Ec-bioD-5_at 0.013431145162199754 Attrib AFFX-r2-P1-cre-3_at 0.020728949189650916 Attrib AFFX-r2-P1-cre-5_at 0.03331426375110361 Attrib AFFX-ThrX-3_at -0.042343121220268065 Attrib AFFX-ThrX-5_at -0.04580708368014876 Attrib AFFX-ThrX-M_at -0.029925579255173262 Attrib AFFX-TrpnX-3_at 0.015235584945341355 Attrib AFFX-TrpnX-5_at -0.046937817624552486 Attrib AFFX-TrpnX-M_at 0.03445047431181349 Class Glioblastoma Input Node 0 Class Astrocytoma Input Node 1 Class Oligodendrioglioma Input Node 2 Class glioblastoma-cell-line Input Node 3 Time taken to build model: 778.17 seconds Time taken to test model on training data: 1.21 seconds === Error on training data === Correctly Classified Instances 26 70.2703 % Incorrectly Classified Instances 11 29.7297 % Kappa statistic 0.5778 Mean absolute error 0.1915 Root mean squared error 0.3054 Relative absolute error 51.7251 % Root relative squared error 71.0433 % Total Number of Instances 37 === Detailed Accuracy By Class === TP Rate FP Rate Precision Recall F-Measure MCC ROC Area PRC Area Class 1,000 0,440 0,522 1,000 0,686 0,541 0,853 0,683 Glioblastoma 0,125 0,000 1,000 0,125 0,222 0,317 0,983 0,950 Astrocytoma 0,429 0,000 1,000 0,429 0,600 0,615 0,771 0,645 Oligodendrioglioma 1,000 0,000 1,000 1,000 1,000 1,000 1,000 1,000 glioblastoma-cell-line Weighted Avg. 0,703 0,143 0,845 0,703 0,654 0,631 0,905 0,819 === Confusion Matrix === a b c d <-- classified as 12 0 0 0 | a = Glioblastoma 7 1 0 0 | b = Astrocytoma 4 0 3 0 | c = Oligodendrioglioma 0 0 0 10 | d = glioblastoma-cell-line Time taken to perform cross-validation: 1635.77 seconds === Stratified cross-validation === Correctly Classified Instances 26 70.2703 % Incorrectly Classified Instances 11 29.7297 % Kappa statistic 0.6018 Mean absolute error 0.1945 Root mean squared error 0.3233 Relative absolute error 52.3872 % Root relative squared error 74.9699 % Total Number of Instances 37 === Detailed Accuracy By Class === TP Rate FP Rate Precision Recall F-Measure MCC ROC Area PRC Area Class 0,667 0,040 0,889 0,667 0,762 0,684 0,923 0,904 Glioblastoma 0,750 0,241 0,462 0,750 0,571 0,439 0,823 0,505 Astrocytoma 0,286 0,100 0,400 0,286 0,333 0,213 0,743 0,509 Oligodendrioglioma 1,000 0,000 1,000 1,000 1,000 1,000 1,000 1,000 glioblastoma-cell-line Weighted Avg. 0,703 0,084 0,734 0,703 0,704 0,627 0,888 0,769 === Confusion Matrix === a b c d <-- classified as 8 3 1 0 | a = Glioblastoma 0 6 2 0 | b = Astrocytoma 1 4 2 0 | c = Oligodendrioglioma 0 0 0 10 | d = glioblastoma-cell-line