Options: -C 0.25 -M 2 

=== Classifier model (full training set) ===

J48 pruned tree
------------------

NM_152520 <= 5.21474
|   NM_203486 <= 5.928674: low_grade_papillary_urothelial_carcinoma (8.0)
|   NM_203486 > 5.928674: high_grade_papillary_urothelial_carcinoma (8.0)
NM_152520 > 5.21474: normal (8.0)

Number of Leaves  : 	3

Size of the tree : 	5


Time taken to build model: 0.34 seconds

Time taken to test model on training data: 0.18 seconds

=== Error on training data ===

Correctly Classified Instances          24              100      %
Incorrectly Classified Instances         0                0      %
Kappa statistic                          1     
Mean absolute error                      0     
Root mean squared error                  0     
Relative absolute error                  0      %
Root relative squared error              0      %
Total Number of Instances               24     


=== Detailed Accuracy By Class ===

                 TP Rate  FP Rate  Precision  Recall   F-Measure  MCC      ROC Area  PRC Area  Class
                 1,000    0,000    1,000      1,000    1,000      1,000    1,000     1,000     normal
                 1,000    0,000    1,000      1,000    1,000      1,000    1,000     1,000     low_grade_papillary_urothelial_carcinoma
                 1,000    0,000    1,000      1,000    1,000      1,000    1,000     1,000     high_grade_papillary_urothelial_carcinoma
Weighted Avg.    1,000    0,000    1,000      1,000    1,000      1,000    1,000     1,000     


=== Confusion Matrix ===

 a b c   <-- classified as
 8 0 0 | a = normal
 0 8 0 | b = low_grade_papillary_urothelial_carcinoma
 0 0 8 | c = high_grade_papillary_urothelial_carcinoma

Time taken to perform cross-validation: 0.46 seconds


=== Stratified cross-validation ===

Correctly Classified Instances          16               66.6667 %
Incorrectly Classified Instances         8               33.3333 %
Kappa statistic                          0.5   
Mean absolute error                      0.2222
Root mean squared error                  0.4714
Relative absolute error                 49.6732 %
Root relative squared error             99.213  %
Total Number of Instances               24     


=== Detailed Accuracy By Class ===

                 TP Rate  FP Rate  Precision  Recall   F-Measure  MCC      ROC Area  PRC Area  Class
                 0,875    0,188    0,700      0,875    0,778      0,657    0,844     0,654     normal
                 0,375    0,063    0,750      0,375    0,500      0,395    0,656     0,490     low_grade_papillary_urothelial_carcinoma
                 0,750    0,250    0,600      0,750    0,667      0,478    0,750     0,533     high_grade_papillary_urothelial_carcinoma
Weighted Avg.    0,667    0,167    0,683      0,667    0,648      0,510    0,750     0,559     


=== Confusion Matrix ===

 a b c   <-- classified as
 7 0 1 | a = normal
 2 3 3 | b = low_grade_papillary_urothelial_carcinoma
 1 1 6 | c = high_grade_papillary_urothelial_carcinoma